Josef Järhult
Professor at Institutionen för medicinska vetenskaper; Infektionsmedicin
- Telephone:
- +46 18 611 24 03
- E-mail:
- Josef.Jarhult@medsci.uu.se
- Visiting address:
- Akademiska sjukhuset
Infektion, ingång 34, 1 tr - Postal address:
- Akademiska sjukhuset
Infektion, ingång 34, 1 tr
751 85 Uppsala
Visiting researcher at Institutionen för medicinsk biokemi och mikrobiologi; Infektioner och immunitet; Åke Lundkvist
- Telephone:
- +46 18 471 43 35
- E-mail:
- josef.jarhult@imbim.uu.se
- Visiting address:
- BMC
Husargatan 3
752 37 UPPSALA - Postal address:
- Box 582
751 23 UPPSALA
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Publications
Recent publications
- Impact of ceftibuten, ciprofloxacin, nitrofurantoin, pivmecillinam and trimethoprim-sulphamethoxazole on the intestinal microbiota and resistome: a randomized controlled trial with healthy adults (2024)
- Tumor Predisposing Post-Zygotic Chromosomal Alterations in Bladder Cancer-Insights from Histologically Normal Urothelium (2024)
- Early Staphylococcal Periprosthetic Joint Infection (PJI) Treated with Debridement, Antibiotics, and Implant Retention (DAIR) (2023)
- Reduced Binding between Omicron B.1.1.529 and the Human ACE2 Receptor in a Surrogate Virus Neutralization Test for SARS-CoV-2 (2023)
- Antibiotic use during coronavirus disease 2019 intensive care unit shape multidrug resistance bacteriuria (2023)
All publications
Articles
- Tumor Predisposing Post-Zygotic Chromosomal Alterations in Bladder Cancer-Insights from Histologically Normal Urothelium (2024)
- Early Staphylococcal Periprosthetic Joint Infection (PJI) Treated with Debridement, Antibiotics, and Implant Retention (DAIR) (2023)
- Reduced Binding between Omicron B.1.1.529 and the Human ACE2 Receptor in a Surrogate Virus Neutralization Test for SARS-CoV-2 (2023)
- Antibiotic use during coronavirus disease 2019 intensive care unit shape multidrug resistance bacteriuria (2023)
- Incidence of Rifampicin Resistance in Periprosthetic Joint Infection (2023)
- Exploring the epidemiology of mcr genes, genetic context and plasmids in Enterobacteriaceae originating from pigs and humans on farms in Thailand (2023)
- Infectious SARS-CoV-2 is rarely present in the nasopharynx samples collected from Swedish hospitalized critically ill COVID-19 patients (2023)
- A Comparison of Host Responses to Infection with Wild-Type Avian Influenza Viruses in Chickens and Tufted Ducks (2023)
- Temporal pathway analysis of cerebrospinal fluid proteome in herpes simplex encephalitis (2023)
- An oseltamivir-resistant avian H1N1 influenza A virus can transmit from mallards to chickens similarly to a wild-type strain (2023)
- Loss of Y in leukocytes as a risk factor for critical COVID-19 in men (2022)
- 3D-printed porous Ti6Al4V alloys with silver coating combine osteocompatibility and antimicrobial properties (2022)
- Trabecular Titanium for Orthopedic Applications (2022)
- Dissemination of Resistant Escherichia coli Among Wild Birds, Rodents, Flies, and Calves on Dairy Farms (2022)
- Genome-associations of extended-spectrum ss-lactamase producing (ESBL) or AmpC producing E. coli in small and medium pig farms from Khon Kaen province, Thailand (2022)
- Molecular Detection of Colistin Resistance mcr-1 Gene in Multidrug-Resistant Escherichia coli Isolated from Chicken (2022)
- Targeting the NS2B-NS3 protease of tick-borne encephalitis virus with pan-flaviviral protease inhibitors (2021)
- Selection of Resistant Bacteria in Mallards Exposed to Subinhibitory Concentrations of Ciprofloxacin in Their Water Environment (2021)
- Residual antimicrobial agents in food originating from animals (2021)
- Exploring the Antibiotic Resistance Burden in Livestock, Livestock Handlers and Their Non-Livestock Handling Contacts (2021)
- Geographic Drivers of Antimicrobial Use and Resistance in Pigs in Khon Kaen Province, Thailand (2021)
- The impact of viremia on organ failure, biomarkers and mortality in a Swedish cohort of critically ill COVID-19 patients (2021)
- Molecular Characterization of Multidrug-Resistant Yersinia enterocolitica From Foodborne Outbreaks in Sweden (2021)
- Antimicrobial and osteoconductive properties of two different types of titanium silver coating (2021)
- Characterization of Klebsiella pneumoniae complex isolates from pigs and humans in farms in Thailand (2021)
- A high-quality genome and comparison of short-versus long-read transcriptome of the palaearctic duck Aythya fuligula (tufted duck) (2021)
- Novel mcr-3.40 variant co-located with mcr-2.3 and bla(CTX-M-63) on an IncHI1B/IncFIB plasmid found in Klebsiella pneumoniae from a healthy carrier in Thailand (2021)
- On-Site Pilot Testing of Hospital Wastewater Ozonation to Reduce Pharmaceutical Residues and Antibiotic-Resistant Bacteria (2021)
- Multidrug Antimicrobial Resistance and Molecular Detection of mcr-1 Gene in Salmonella Species Isolated from Chicken (2021)
- Mitigation of the replication of SARS-CoV-2 by nitric oxide in vitro (2020)
- Multi laboratory evaluation of ReaScan TBE IgM rapid test, 2016 to 2017 (2020)
- Genome sequences of two multidrug-resistant Escherichia coli strains MEZEC8 and MEZEC10 isolated from livestock in South Africa (2020)
- Genome sequences of two Salmonella enterica strains (MEZSAL74 and MEZSAL81) harbouring multiple antimicrobial resistance genes isolated from livestock in South Africa (2020)
- From SARS to COVID-19 (2020)
- Presence of SARS-CoV-2 in urine is rare and not associated with acute kidney injury in critically ill COVID-19 patients (2020)
- Antibiotic use in pig farms at different levels of intensification-Farmers' practices in northeastern Thailand (2020)
- Prevalence and Diversity of Avian Influenza Virus Hemagglutinin Sero-Subtypes in Poultry and Wild Birds in Bangladesh (2020)
- Serological Evidence of Avian Influenza in Captive Wild Birds in a Zoo and Two Safari Parks in Bangladesh (2020)
- Spatio-Temporal Mutational Profile Appearances of Swedish SARS-CoV-2 during the Early Pandemic (2020)
- Antimicrobial Resistance in Fecal Escherichia coli from Humans and Pigs at Farms at Different Levels of Intensification (2020)
- Towards pandemic preparedness beyond COVID-19 (2020)
- Maximization of Livestock Anthrax Vaccination Coverage in Bangladesh (2020)
- Antimicrobial Resistance Patterns in Organic and Conventional Dairy Herds in Sweden (2020)
- A Comparative Study of the Innate Humoral Immune Response to Avian Influenza Virus in Wild and Domestic Mallards (2020)
- Torque teno virus viral load is related to age, CMV infection and HLA type but not to Alzheimer's disease (2020)
- Carriage of carbapenemase- and extended-spectrum cephalosporinase-producing Escherichia coli and Klebsiella pneumoniae in humans and livestock in rural Cambodia (2019)
- A One Health - One World initiative to control antibiotic resistance (2019)
- Genome Sequence of Listeria innocua Strain MEZLIS26, Isolated from a Goat in South Africa (2019)
- Linezolid in the treatment of periprosthetic joint infection caused by coagulase-negative staphylococci (2019)
- Attachment Patterns of Human and Avian Influenza Viruses to Trachea and Colon of 26 Bird Species (2019)
- Health and zoonotic Infections of snow leopards Panthera unica in the South Gobi desert of Mongolia. (2019)
- Genetic analyses of Seoul hantavirus genome recovered from rats (Rattus norvegicus) in the Netherlands unveils diverse routes of spread into Europe (2019)
- Resistance in the wild (2019)
- Resistance in the wild (2019)
- Avian influenza viruses at the wild-domestic bird interface in Egypt (2019)
- Global patterns of avian influenza A (H7) (2019)
- Detection of Leptospira in Urban Swedish Rats (2019)
- The Potential of Isolation Source to Predict Colonization in Avian Hosts (2018)
- A rapid and transient innate immune response to avian influenza infection in mallards (2018)
- Expression of immune genes RIG-I and Mx in mallard ducks infected with low pathogenic avian influenza (LPAI): (2018)
- High Prevalence and Temporal Variation of Extended Spectrum β-Lactamase–Producing Bacteria in Urban Swedish Mallards (2018)
- Environmental resistance development to influenza antivirals (2018)
- Antibiotic-resistant Escherichia coli in migratory birds inhabiting remote Alaska. (2018)
- Long-term carriage and rapid transmission of extended spectrum beta-lactamase-producing E. coli within a flock of Mallards in the absence of antibiotic selection (2018)
- The enzyme toilet rim block “pCure” does not efficiently remove drug residues in a hospital setting - (2018)
- Alternate routes of influenza A virus infection in Mallard (Anas platyrhynchos) (2018)
- RNAlater (R) is a viable storage option for avian influenza sampling in logistically challenging conditions (2018)
- ESBL-producing Escherichia coli in Swedish gulls (2017)
- Removal of 30 active pharmaceutical ingredients in surface water under long-term artificial UV irradiation (2017)
- In vivo mallard experiments indicate that zanamivir has less potential for environmental influenza A virus resistance development than oseltamivir (2017)
- Urbanization and the dynamics of RNA viruses in Mallards (Anas platyrhynchos) (2017)
- Increased prevalence of antibiotic resistant E. coli in gulls sampled in Southcentral Alaska is associated with urban environments (2016)
- A Panel of Stably Expressed Reference Genes for Real-Time qPCR Gene Expression Studies of Mallards (Anas platyrhynchos) (2016)
- Fate of three anti-influenza drugs during ozonation of wastewater effluents - degradation and formation of transformation products. (2016)
- Fecal Carriage of Extended-Spectrum -Lactamases in Healthy Humans, Poultry, and Wild Birds in Leon, NicaraguaA Shared Pool of bla(CTX-M) Genes and Possible Interspecies Clonal Spread of Extended-Spectrum -Lactamases-Producing Escherichia coli (2016)
- High Prevalence and Putative Lineage Maintenance of Avian Coronaviruses in Scandinavian Waterfowl. (2016)
- Absence of vancomycin-resistant enterococci among highly ESBL-positive crows (Corvus splendens) foraging on hospital waste in Bangladesh (2015)
- Oseltamivir Resistance in Influenza A(H6N2) Caused by an R292K Substitution in Neuraminidase Is Not Maintained in Mallards without Drug Pressure. (2015)
- Oseltamivir-Resistant Influenza A (H1N1) Virus Strain with an H274Y Mutation in Neuraminidase Persists without Drug Pressure in Infected Mallards (2015)
- Influenza A(H7N9) Virus Acquires Resistance-Related Neuraminidase I222T Substitution When Infected Mallards Are Exposed to Low Levels of Oseltamivir in Water (2015)
- One Health (2015)
- Tamiflu (2015)
- Mallard or chicken? (2015)
- Online solid phase extraction liquid chromatography using bonded zwitterionic stationary phases and tandem mass spectrometry for rapid environmental trace analysis of highly polar hydrophilic compounds - Application for the antiviral drug Zanamivir (2015)
- Varför är det så svårt att förstå betydelsen av One Health? (2014)
- Antibiotic resistance in wild birds (2014)
- Study of oseltamivir and zanamivir resistance-related mutations in influenza viruses isolated from wild mallards in Sweden (2014)
- Intra- and Inter-Pandemic Variations of Antiviral, Antibiotics and Decongestants in Wastewater Treatment Plants and Receiving Rivers (2014)
- Pathobiology and virus shedding of low-pathogenic avian influenza virus (A/H1N1) infection in mallards exposed to oseltamivir (2013)
- Resistance Mutation R292K Is Induced in Influenza A(H6N2) Virus by Exposure of Infected Mallards to Low Levels of Oseltamivir (2013)
- Zero prevalence of extended spectrum beta-lactamase-producing bacteria in 300 breeding Collared Flycatchers in Sweden (2013)
- Compliance to Oseltamivir among Two Populations in Oxfordshire, United Kingdom Affected by Influenza A(H1N1)pdm09, November 2009 - A Waste Water Epidemiology Study. (2013)
- Oseltamivir (Tamiflu(®)) in the environment, resistance development in influenza A viruses of dabbling ducks and the risk of transmission of an oseltamivir-resistant virus to humans (2012)
- Environmental Levels of the Antiviral Oseltamivir Induce Development of Resistance Mutation H274Y in Influenza A/H1N1 Virus in Mallards (2011)
- Detection of the antiviral drug oseltamivir in aquatic environments (2009)
- Resting Microglial Cells in Vitro: Analysis of Morphology and Adhesion Molecule Expression in Organotypic Hippocampal Slice Cultures. (1996)
- Identification of unique and potent inhibitors of SARS-CoV-2 main protease from DNA-encoded chemical libraries
- Spread of resistance plasmids and selection of resistant bacteria among Mallards exposed to sub-inhibitory concentrations of antibiotics in their water environment
- Early Staphylococcal Periprosthetic joint infection (PJI) caused by Staphylocci resistant to rifampicin
- Oseltamivir- and Zanamivir-Resistance Related Mutations in Influenza A Viruses Isolated from Wild Mallards in Sweden Studied by a Colorimetric Neuraminidase Inhibition Assay
Books
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