Nima Rafati
Bioinformatician at Institutionen för medicinsk biokemi och mikrobiologi; NBIS - National Bioinformatics Infrastructure Sweden
- E-mail:
- nima.rafati@imbim.uu.se
- Visiting address:
- BMC
Husargatan 3
752 37 UPPSALA - Postal address:
- Box 582
751 23 UPPSALA
Bioinformatician at Institutionen för cell- och molekylärbiologi; NBIS - National Bioinformatics Infrastructure Sweden
- Visiting address:
- Husargatan 3
75237 Uppsala - Postal address:
- Box 596
75124 Uppsala
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Publications
Recent publications
- Copy number variations and their effect on the plasma proteome. (2023)
- The Dynamics of Adaptation to Stress from Standing Genetic Variation and de novo Mutations (2022)
- MYCN induces cell-specific tumorigenic growth in RB1-proficient human retinal organoid and chicken retina models of retinoblastoma (2022)
- Contribution of rare whole-genome sequencing variants to plasma protein levels and the missing heritability (2022)
- Genomic dynamics of brown trout populations released to a novel environment (2022)
All publications
Articles
- Copy number variations and their effect on the plasma proteome. (2023)
- The Dynamics of Adaptation to Stress from Standing Genetic Variation and de novo Mutations (2022)
- MYCN induces cell-specific tumorigenic growth in RB1-proficient human retinal organoid and chicken retina models of retinoblastoma (2022)
- Contribution of rare whole-genome sequencing variants to plasma protein levels and the missing heritability (2022)
- Genomic dynamics of brown trout populations released to a novel environment (2022)
- Whole-genome Sequencing of Follicular Thyroid Carcinomas Reveal Recurrent Mutations in MicroRNA Processing Subunit DGCR8 (2021)
- Whole-genome genotyping and resequencing reveal the association of a deletion in the complex interferon alpha gene cluster with hypothyroidism in dogs (2020)
- DNA demethylation regulates gene expression in IgE-activated mouse mast cells. (2020)
- Reconstruction of the birth of a male sex chromosome present in Atlantic herring (2020)
- Brain Transcriptomics of Wild and Domestic Rabbits Suggests That Changes in Dopamine Signaling and Ciliary Function Contributed to Evolution of Tameness (2020)
- Improved power and precision with whole genome sequencing data in genome-wide association studies of inflammatory biomarkers (2019)
- Comparative omics and feeding manipulations in chicken indicate a shift of the endocrine role of visceral fat towards reproduction (2018)
- Changes in brain architecture are consistent with altered fear processing in domestic rabbits (2018)
- A genomic map of clinal variation across the European rabbit hybrid zone (2018)
- Moderate nucleotide diversity in the Atlantic herring is associated with a low mutation rate (2017)
- Parallel adaptive evolution of geographically distant herring populations on both sides of the North Atlantic Ocean (2017)
- The genetic basis for ecological adaptation of the Atlantic herring revealed by genome sequencing (2016)
- Large Deletions at the SHOX Locus in the Pseudoautosomal Region Are Associated with Skeletal Atavism in Shetland Ponies (2016)
- Identification of the Long-Sought Leptin in Chicken and Duck (2016)
- Amelanism in the corn snake is associated with the insertion of an LTR-retrotransposon in the OCA2 gene (2015)
- Rabbit genome analysis reveals a polygenic basis for phenotypic change during domestication (2014)
- Population-scale sequencing reveals genetic differentiation due to local adaptation in Atlantic herring (2012)